Install R, dependencies and RStudio
All code was tested with R Version 4.2.1, RTools42, and Tidyverse V 1.3.2.
Windows
Download and install a recent R version (V 4.2.1).
Download and install Rtools42 according to your R-version (V 4.2.1). It is required to install the packages.
Download and install RStudio.
Debian/Ubuntu
To install R and its dependencies, enter the following commands into the terminal.
wget -qO- https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc | sudo gpg --dearmor -o /usr/share/keyrings/r-project.gpg
echo "deb [signed-by=/usr/share/keyrings/r-project.gpg] https://cloud.r-project.org/bin/linux/ubuntu jammy-cran40/" | sudo tee -a /etc/apt/sources.list.d/r-project.list
sudo apt update
sudo apt install --no-install-recommends r-base
sudo apt install r-base-dev
sudo apt install libcurl4-openssl-dev libssl-dev libxml2-dev libfontconfig1-dev
Install RStudio.
Then “Right-Click -> Open With ->Software Install” should help in the installation.
Mac
We need some collaborators, who try out the BIDSconvertR on a Mac system. Contact me, if you are interested.